MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus johnsonii
19428wE2_CC3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 101
bases: 1,925,316 bps
CDS: 1,806
rRNA: 9
tRNA: 59
tmRNA: 1
Total number of protein coding genes annotated/found:
1,747
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5026|JADGKX010000012.1
MBF0771825.1
Genome Viewer
NA
AA
13188/4396
38377-25190
DUF1542 domain-containing protein
SEQF5026|JADGKX010000015.1
MBF0771983.1
Genome Viewer
NA
AA
12114/4038
29923-42036
BspA family leucine-rich repeat surface protein
SEQF5026|JADGKX010000005.1
MBF0771227.1
Genome Viewer
NA
AA
10302/3434
26612-16311
LPXTG cell wall anchor domain-containing protein
SEQF5026|JADGKX010000007.1
MBF0771460.1
Genome Viewer
NA
AA
8988/2996
58094-67081
LPXTG cell wall anchor domain-containing protein
SEQF5026|JADGKX010000003.1
MBF0770999.1
Genome Viewer
NA
AA
7104/2368
18102-10999
YPDG domain-containing protein
SEQF5026|JADGKX010000014.1
MBF0771941.1
Genome Viewer
NA
AA
5595/1865
38486-44080
YSIRK-type signal peptide-containing protein
SEQF5026|JADGKX010000019.1
MBF0772181.1
Genome Viewer
NA
AA
4812/1604
33815-38626
YSIRK-type signal peptide-containing protein
SEQF5026|JADGKX010000002.1
MBF0770964.1
Genome Viewer
NA
AA
4299/1433
143211-147509
PolC-type DNA polymerase III
SEQF5026|JADGKX010000009.1
MBF0771640.1
Genome Viewer
NA
AA
4089/1363
68200-72288
LPXTG cell wall anchor domain-containing protein
SEQF5026|JADGKX010000005.1
MBF0771279.1
Genome Viewer
NA
AA
3672/1224
64787-61116
DNA-directed RNA polymerase subunit beta'
SEQF5026|JADGKX010000019.1
MBF0772157.1
Genome Viewer
NA
AA
3657/1219
12791-9135
MMPL family transporter
SEQF5026|JADGKX010000005.1
MBF0771280.1
Genome Viewer
NA
AA
3639/1213
68443-64805
DNA-directed RNA polymerase subunit beta
SEQF5026|JADGKX010000004.1
MBF0771168.1
Genome Viewer
NA
AA
3615/1205
63565-67179
helicase-exonuclease AddAB subunit AddA
SEQF5026|JADGKX010000002.1
MBF0770936.1
Genome Viewer
NA
AA
3561/1187
114947-118507
chromosome segregation protein SMC
SEQF5026|JADGKX010000005.1
MBF0771292.1
Genome Viewer
NA
AA
3498/1166
88687-85190
transcription-repair coupling factor
SEQF5026|JADGKX010000004.1
MBF0771167.1
Genome Viewer
NA
AA
3477/1159
60088-63564
PD-(D/E)XK nuclease family protein
SEQF5026|JADGKX010000020.1
MBF0772222.1
Genome Viewer
NA
AA
3189/1063
29035-32223
carbamoyl-phosphate synthase large subunit
SEQF5026|JADGKX010000004.1
MBF0771187.1
Genome Viewer
NA
AA
3165/1055
87207-90371
carbamoyl phosphate synthase large subunit
SEQF5026|JADGKX010000021.1
MBF0772246.1
Genome Viewer
NA
AA
3117/1039
23284-20168
DNA polymerase III subunit alpha
SEQF5026|JADGKX010000021.1
MBF0772230.1
Genome Viewer
NA
AA
3099/1033
5874-2776
type I restriction endonuclease subunit R
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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